Genome-Wide Identification of the Invertase Gene Family in Populus
Identifieur interne : 000626 ( Main/Exploration ); précédent : 000625; suivant : 000627Genome-Wide Identification of the Invertase Gene Family in Populus
Auteurs : Zhong Chen [République populaire de Chine] ; Kai Gao [République populaire de Chine] ; Xiaoxing Su [République populaire de Chine] ; Pian Rao [République populaire de Chine] ; Xinmin An [République populaire de Chine]Source :
- PLoS ONE [ 1932-6203 ] ; 2015.
Abstract
Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (
Url:
DOI: 10.1371/journal.pone.0138540
PubMed: 26393355
PubMed Central: 4579127
Affiliations:
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Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of the Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Gao, Kai" sort="Gao, Kai" uniqKey="Gao K" first="Kai" last="Gao">Kai Gao</name><affiliation wicri:level="3"><nlm:aff id="aff001"><addr-line>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, 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first="Zhong" last="Chen">Zhong Chen</name><affiliation wicri:level="3"><nlm:aff id="aff001"><addr-line>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="aff002"><addr-line>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of the Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest 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type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Rao, Pian" sort="Rao, Pian" uniqKey="Rao P" first="Pian" last="Rao">Pian Rao</name><affiliation wicri:level="3"><nlm:aff id="aff001"><addr-line>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="aff002"><addr-line>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of the Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of the Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="An, Xinmin" sort="An, Xinmin" uniqKey="An X" first="Xinmin" last="An">Xinmin An</name><affiliation wicri:level="3"><nlm:aff id="aff001"><addr-line>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="aff002"><addr-line>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of the Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of the Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Invertase plays a crucial role in carbohydrate partitioning and plant development as it catalyses the irreversible hydrolysis of sucrose into glucose and fructose. The invertase family in plants is composed of two sub-families: acid invertases, which are targeted to the cell wall and vacuole; and neutral/alkaline invertases, which function in the cytosol. In this study, 5 cell wall invertase genes (<italic>PtCWINV1</italic>-<italic>5</italic>), 3 vacuolar invertase genes (<italic>PtVINV1</italic>-<italic>3</italic>) and 16 neutral/alkaline invertase genes (<italic>PtNINV1</italic>-<italic>16</italic>) were identified in the <italic>Populus</italic> genome and found to be distributed on 14 chromosomes. A comprehensive analysis of poplar invertase genes was performed, including structures, chromosome location, phylogeny, evolutionary pattern and expression profiles. Phylogenetic analysis indicated that the two sub-families were both divided into two clades. Segmental duplication is contributed to neutral/alkaline sub-family expansion. Furthermore, the <italic>Populus</italic> invertase genes displayed differential expression in roots, stems, leaves, leaf buds and in response to salt/cold stress and pathogen infection. In addition, the analysis of enzyme activity and sugar content revealed that invertase genes play key roles in the sucrose metabolism of various tissues and organs in poplar. This work lays the foundation for future functional analysis of the invertase genes in <italic>Populus</italic> and other woody perennials.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Roitsch, T" uniqKey="Roitsch T">T Roitsch</name></author><author><name sortKey="Gonzalez, Mc" uniqKey="Gonzalez M">MC Gonzalez</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sturm, A" uniqKey="Sturm A">A Sturm</name></author><author><name sortKey="Tang, Gq" uniqKey="Tang G">GQ Tang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sturm, A" uniqKey="Sturm A">A Sturm</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Haouazine Takvorian, N" uniqKey="Haouazine Takvorian N">N Haouazine-Takvorian</name></author><author><name sortKey="Tymowska Lalanne, Z" uniqKey="Tymowska Lalanne Z">Z Tymowska-Lalanne</name></author><author><name 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sortKey="Wang, S" uniqKey="Wang S">S Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Canam, T" uniqKey="Canam T">T Canam</name></author><author><name sortKey="Unda, F" uniqKey="Unda F">F Unda</name></author><author><name sortKey="Mansfield, Sd" uniqKey="Mansfield S">SD Mansfield</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Balk, Pa" uniqKey="Balk P">PA Balk</name></author><author><name sortKey="De Boer, Ad" uniqKey="De Boer A">AD de Boer</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Benhamou, N" uniqKey="Benhamou N">N Benhamou</name></author><author><name sortKey="Grenier, J" uniqKey="Grenier J">J Grenier</name></author><author><name sortKey="Chrispeels, Mj" uniqKey="Chrispeels M">MJ Chrispeels</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>République populaire de Chine</li></country><settlement><li>Pékin</li></settlement></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Chen, Zhong" sort="Chen, Zhong" uniqKey="Chen Z" first="Zhong" last="Chen">Zhong Chen</name></noRegion><name sortKey="An, Xinmin" sort="An, Xinmin" uniqKey="An X" first="Xinmin" last="An">Xinmin An</name><name sortKey="An, Xinmin" sort="An, Xinmin" uniqKey="An X" first="Xinmin" last="An">Xinmin An</name><name sortKey="Chen, Zhong" sort="Chen, Zhong" uniqKey="Chen Z" first="Zhong" last="Chen">Zhong Chen</name><name sortKey="Gao, Kai" sort="Gao, Kai" uniqKey="Gao K" first="Kai" last="Gao">Kai Gao</name><name sortKey="Gao, Kai" sort="Gao, Kai" uniqKey="Gao K" first="Kai" last="Gao">Kai Gao</name><name sortKey="Rao, Pian" sort="Rao, Pian" uniqKey="Rao P" first="Pian" last="Rao">Pian Rao</name><name sortKey="Rao, Pian" sort="Rao, Pian" uniqKey="Rao P" first="Pian" last="Rao">Pian Rao</name><name sortKey="Su, Xiaoxing" sort="Su, Xiaoxing" uniqKey="Su X" first="Xiaoxing" last="Su">Xiaoxing Su</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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